Research workbench
NMR representative structure of intimin-190 (INT190) from enteropathogenic E. COLI
Analyse NMR representative structure of intimin-190 (INT190) from enteropathogenic E.… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1E5U
- Type
- protein
- Length
- 187 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Intimin
- UniProt
- P19809
- Pockets
- 4 · best druggability 0.61
Structure
solution nmr · 1 distinct chain · 17% helix, 35% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| I | Intimin | protein | 187 | 17% helix, 35% strand | P19809 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 187 | 0.61 | 0.82 | 28 | empty |
| 2 | 151 | 0.50 | 0.78 | 28 | empty |
| 3 | 78 | 0.44 | 0.81 | 20 | empty |
| 4 | 54 | 0.34 | 0.78 | 23 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 1E5U · NMR Representative Structure of Intimin-190 (Int190) from Enteropathogenic E. coli · the same entry in another collection · chain I against I, TM-score 1.00
- P19809 · AlphaFold monomer V2.0 prediction for intimin (P19809) · a predicted model of the same protein · chain I against A, TM-score 0.70
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P19809
- Elsewhere: RCSB PDB 1E5U · PDBe 1E5U · UniProt P19809
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