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Crystal structure of a GLYOXALASE/BLEOMYCIN resistance PROTEIN/DIOXYGENASE family enzyme from burkholderia phytofirmans psjn

Analyse Crystal structure of a GLYOXALASE/BLEOMYCIN resistance PROTEIN/DIOXYGENASE… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2RBB
Type: protein
Length: 256 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: GLYOXALASE/BLEOMYCIN resistance PROTEIN/DIOXYGENASE
UniProt: A0GG76
Pockets: 2 · best druggability 0.58

Structure

x-ray diffraction · 2 distinct chains · 29% helix, 39% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	GLYOXALASE/BLEOMYCIN resistance PROTEIN/DIOXYGENASE	protein	129	28% helix, 39% strand	A0GG76
B	GLYOXALASE/BLEOMYCIN resistance PROTEIN/DIOXYGENASE	protein	127	29% helix, 39% strand	A0GG76

Pockets

2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	123	0.58	0.84	21	empty
2	61	0.58	0.89	19	empty

Interfaces

1 interface between chains.

A–B · 2515 Å² buried · 44 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 5 modified (engineered).

Compared structures

2RBB · Crystal structure of a glyoxalase/bleomycin resistance protein/dioxygenase family enzyme… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0GG76
Elsewhere: RCSB PDB 2RBB · PDBe 2RBB · UniProt A0GG76

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