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Crystal structure of the human BETA2 adrenoceptor

Analyse Crystal structure of the human BETA2 adrenoceptor in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
2R4R
Type
protein
Length
647 residues
Chains
3
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Beta-2 adrenergic receptor; Antibody for BETA2 adrenoceptor, light chain; Antibody for…
UniProt
P07550
Pockets
10 · best druggability 0.71

Structure

x-ray diffraction · 3 distinct chains · 23% helix, 29% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ABeta-2 adrenergic receptorprotein21660% helix, 0% strandP07550
LAntibody for BETA2 adrenoceptor, light chainprotein2147% helix, 42% strand—
HAntibody for BETA2 adrenoceptor, heavy chainprotein2171% helix, 44% strand—

Pockets

10 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
12850.710.8538empty
27680.680.7560empty
32240.560.7829empty
41410.500.7921empty
51600.460.7526empty

Interfaces

3 interfaces between chains.

  • L–H · 1867 Ų buried · 16 hydrogen bonds · protein-protein
  • A–H · 483 Ų buried · 8 hydrogen bonds · protein-protein
  • A–L · 375 Ų buried · 5 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 5 disulfide (disulfide).

Compared structures

  • 2R4R · Crystal structure of the human beta2 adrenoceptor · the same entry in another collection · chain A against A, TM-score 1.00
  • P07550 · AlphaFold monomer V2.0 prediction for beta-2 adrenergic receptor (P07550) · a predicted model of the same protein · chain A against A, TM-score 0.92

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