Research workbench
Crystal structure of the periplasmic lipopolysaccharide transport protein lpta (yhbn), orthorhombic form
Analyse Crystal structure of the periplasmic lipopolysaccharide transport protein lpta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2R19
- Type
- protein
- Length
- 276 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein yhbn
- UniProt
- P0ADV1
Structure
x-ray diffraction · 2 distinct chains · 5% helix, 61% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein yhbn | protein | 135 | 6% helix, 59% strand | P0ADV1 |
| B | Protein yhbn | protein | 141 | 4% helix, 64% strand | P0ADV1 |
Interfaces
1 interface between chains.
- A–B · 994 Ų buried · 23 hydrogen bonds · protein-protein
Compared structures
- 2R19 · Crystal structure of the periplasmic lipopolysaccharide transport protein LptA (YhbN)… · the same entry in another collection · chain A against A, TM-score 1.00
- P0ADV1 · AlphaFold monomer V2.0 prediction for lipopolysaccharide export system protein lpta… · a predicted model of the same protein · chain B against A, TM-score 0.94
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0ADV1
- Elsewhere: RCSB PDB 2R19 · PDBe 2R19 · UniProt P0ADV1
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