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Ligand free structure of fungal lectin CGL3

Analyse Ligand free structure of fungal lectin CGL3 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2R0F
Type: protein
Length: 326 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: CGL3 lectin
UniProt: Q206Z5
Pockets: 2 · best druggability 0.32

Structure

x-ray diffraction · 1 distinct chain · 2% helix, 45% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	CGL3 lectin	protein	163	2% helix, 45% strand	Q206Z5

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	82	0.32	0.73	17	empty
2	66	0.25	0.72	17	empty

Interfaces

1 interface between chains.

A–B · 940 Å² buried · 11 hydrogen bonds · protein-protein

Compared structures

2R0F · Ligand free structure of fungal lectin CGL3 · the same entry in another collection · chain A against A, TM-score 1.00
Q206Z5 · AlphaFold monomer V2.0 prediction for galectin-3 (Q206Z5) · a predicted model of the same protein · chain B against A, TM-score 0.97

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q206Z5
Elsewhere: RCSB PDB 2R0F · PDBe 2R0F · UniProt Q206Z5

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