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Crystal structure of the putative sulfatase yidj from bacteroides fragilis. northeast structural genomics consortium target BFR123
Analyse Crystal structure of the putative sulfatase yidj from bacteroides fragilis.… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2QZU
- Type
- protein
- Length
- 465 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative sulfatase yidj
- UniProt
- Q64XZ4
- Pockets
- 2 · best druggability 0.56
Structure
x-ray diffraction · 1 distinct chain · 32% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative sulfatase yidj | protein | 465 | 32% helix, 17% strand | Q64XZ4 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 195 | 0.56 | 0.80 | 29 | empty |
| 2 | 119 | 0.38 | 0.74 | 29 | empty |
Modifications
Observed in the structure: 15 modified (engineered).
Compared structures
- 2QZU · Crystal structure of the putative sulfatase yidJ from Bacteroides fragilis. Northeast… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q64XZ4
- Elsewhere: RCSB PDB 2QZU · PDBe 2QZU · UniProt Q64XZ4
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