Research workbench
Crystal structure of human sdr family member 1
Analyse Crystal structure of human sdr family member 1 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2QQ5
- Type
- protein
- Length
- 238 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DEHYDROGENASE/REDUCTASE sdr family member 1
- EC
- 1.1.-.-
- UniProt
- Q96LJ7
- Pockets
- 3 · best druggability 0.72
Structure
x-ray diffraction · 1 distinct chain · 54% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DEHYDROGENASE/REDUCTASE sdr family member 1 (EC 1.1.-.-) | protein | 238 | 54% helix, 14% strand | Q96LJ7 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 218 | 0.72 | 0.88 | 35 | empty |
| 2 | 103 | 0.48 | 0.81 | 24 | empty |
| 3 | 50 | 0.29 | 0.76 | 15 | empty |
Compared structures
- 2QQ5 · Crystal structure of human SDR family member 1 · the same entry in another collection · chain A against A, TM-score 1.00
- Q96LJ7 · AlphaFold monomer V2.0 prediction for DEHYDROGENASE/REDUCTASE sdr family member 1 (Q96LJ7) · a predicted model of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q96LJ7
- Elsewhere: RCSB PDB 2QQ5 · PDBe 2QQ5 · UniProt Q96LJ7
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.