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Distal C2-like domain of human calpain-7

Analyse Distal C2-like domain of human calpain-7 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2QFE
Type: protein
Length: 139 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Calpain-7
EC: 3.4.22.-
UniProt: Q9Y6W3
Ligands: BR

Structure

x-ray diffraction · 1 distinct chain · 4% helix, 50% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Calpain-7 (EC 3.4.22.-)	protein	139	4% helix, 50% strand	Q9Y6W3

Ligands and binding sites

BR · Bromide ion · ion · 18 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

2QFE · Distal C2-Like Domain of Human Calpain-7 · the same entry in another collection · chain A against A, TM-score 1.00
Q9Y6W3 · AlphaFold monomer V2.0 prediction for calpain-7 (Q9Y6W3) · a predicted model of the same protein · chain A against A, TM-score 0.93

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9Y6W3
Elsewhere: RCSB PDB 2QFE · PDBe 2QFE · UniProt Q9Y6W3

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