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Ensemble refinement of the protein crystal structure of iaa-aminoacid hydrolase from arabidopsis thaliana gene AT5G56660

Analyse Ensemble refinement of the protein crystal structure of iaa-aminoacid hydrolase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2Q43
Type: protein
Length: 375 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Iaa-amino acid hydrolase ILR1-like 2
EC: 3.5.1.-
UniProt: P54970
Pockets: 3 · best druggability 0.59

Structure

x-ray diffraction · 1 distinct chain · 37% helix, 27% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Iaa-amino acid hydrolase ILR1-like 2 (EC 3.5.1.-)	protein	375	37% helix, 27% strand	P54970

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	148	0.59	0.83	21	empty
2	76	0.35	0.76	19	empty
3	106	0.33	0.72	18	empty

Compared structures

2Q43 · Ensemble refinement of the protein crystal structure of IAA-aminoacid hydrolase from… · the same entry in another collection · chain A against A, TM-score 1.00
P54970 · AlphaFold monomer V2.0 prediction for iaa-amino acid hydrolase ILR1-like 2 (P54970) · a predicted model of the same protein · chain A against A, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P54970
Elsewhere: RCSB PDB 2Q43 · PDBe 2Q43 · UniProt P54970

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