Research workbench

Ensemble refinement of the protein crystal structure of AT3G17210 from arabidopsis thaliana

Analyse Ensemble refinement of the protein crystal structure of AT3G17210 from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2Q3P
Type: protein
Length: 103 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Uncharacterized protein AT3G17210
UniProt: Q0WKU8
Ligands: MG
Pockets: 1 · best druggability 0.42

Structure

x-ray diffraction · 1 distinct chain · 34% helix, 28% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Uncharacterized protein AT3G17210	protein	103	34% helix, 28% strand	Q0WKU8

Ligands and binding sites

MG · Magnesium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	58	0.42	0.81	13	empty

Modifications

Observed in the structure: 1 modified (engineered).

Compared structures

2Q3P · Ensemble refinement of the protein crystal structure of At3g17210 from Arabidopsis… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q0WKU8
Elsewhere: RCSB PDB 2Q3P · PDBe 2Q3P · UniProt Q0WKU8

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.