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Crystal structure of GK1651 from geobacillus kaustophilus

Analyse Crystal structure of GK1651 from geobacillus kaustophilus in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2P17
Type: protein
Length: 249 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Pirin-like protein
UniProt: Q5KZF0
Ligands: FE
Pockets: 1 · best druggability 0.54

Structure

x-ray diffraction · 1 distinct chain · 4% helix, 58% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Pirin-like protein	protein	249	4% helix, 58% strand	Q5KZF0

Ligands and binding sites

FE · Fe (III) ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	119	0.54	0.82	18	FE

Modifications

Observed in the structure: 8 modified (engineered).

Compared structures

2P17 · Crystal structure of GK1651 from Geobacillus kaustophilus · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q5KZF0
Elsewhere: RCSB PDB 2P17 · PDBe 2P17 · UniProt Q5KZF0

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