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Structural genomics, the crystal structure of a conserved putative protein from pseudomonas syringae pv. tomato str. DC3000

Analyse Structural genomics, the crystal structure of a conserved putative protein from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
2P0T
Type
protein
Length
148 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
UPF0307 protein PSPTO_4464
UniProt
Q87WS9

Structure

x-ray diffraction · 1 distinct chain · 79% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AUPF0307 protein PSPTO_4464protein14879% helix, 0% strandQ87WS9

Ligands and binding sites

  • FMT · Formic acid · additive · 3 copies · chains A
  • PEG · Di(hydroxyethyl)ether · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 1 modified (engineered).

Compared structures

  • 2P0T · Structural Genomics, the crystal structure of a conserved putative protein from… · the same entry in another collection · chain A against A, TM-score 1.00
  • Q87WS9 · AlphaFold monomer V2.0 prediction for UPF0307 protein PSPTO_4464 (Q87WS9) · a predicted model of the same protein · chain A against A, TM-score 0.97

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