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ARHGAP9 pH domain in complex with INS(1,4,5)P3

Analyse ARHGAP9 pH domain in complex with INS(1,4,5)P3 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
2P0D
Type
protein
Length
107 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Rho GTPase-activating protein 9
UniProt
Q9BRR9
Ligands
I3P

Structure

x-ray diffraction · 1 distinct chain · 19% helix, 44% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ARho GTPase-activating protein 9protein10719% helix, 44% strandQ9BRR9

Ligands and binding sites

  • I3P · D-myo-inositol-1,4,5-triphosphate · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 2P0D · ArhGAP9 PH domain in complex with Ins(1,4,5)P3 · the same entry in another collection · chain A against A, TM-score 1.00
  • Q9BRR9 · AlphaFold monomer V2.0 prediction for rho GTPase-activating protein 9 (Q9BRR9) · a predicted model of the same protein · chain A against A, TM-score 0.97

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