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Crystal structure of stal-pap complex

Analyse Crystal structure of stal-pap complex in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2OVF
Type: protein
Length: 248 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Stal
UniProt: Q8KLM3
Ligands: A3P
Pockets: 2 · best druggability 0.61

Structure

x-ray diffraction · 1 distinct chain · 51% helix, 10% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Stal	protein	248	51% helix, 10% strand	Q8KLM3

Ligands and binding sites

A3P · Adenosine-3'-5'-diphosphate · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	414	0.61	0.76	42	A3P
2	119	0.55	0.83	22	empty

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

2OVF · Crystal Structure of StaL-PAP complex · the same entry in another collection · chain A against A, TM-score 1.00
Q8KLM3 · AlphaFold monomer V2.0 prediction for desulfo-A47934 sulfotransferase (Q8KLM3) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8KLM3
Elsewhere: RCSB PDB 2OVF · PDBe 2OVF · UniProt Q8KLM3

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