Research workbench
Crystal structure of Q9HYQ7_PSEAE from pseudomonas aeruginosa. northeast structural genomics consortium target PAR82
Analyse Crystal structure of Q9HYQ7_PSEAE from pseudomonas aeruginosa. northeast… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2OKA
- Type
- protein
- Length
- 336 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Hypothetical protein
- UniProt
- Q9HYQ7
- Pockets
- 2 · best druggability 0.52
Structure
x-ray diffraction · 1 distinct chain · 36% helix, 29% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D | Hypothetical protein | protein | 84 | 36% helix, 29% strand | Q9HYQ7 |
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 156 | 0.52 | 0.80 | 27 | empty |
| 2 | 128 | 0.52 | 0.81 | 20 | empty |
Interfaces
6 interfaces between chains.
- A–B · 778 Ų buried · 4 hydrogen bonds · protein-protein
- C–D · 777 Ų buried · 4 hydrogen bonds · protein-protein
- A–D · 517 Ų buried · 0 hydrogen bonds · protein-protein
- B–C · 509 Ų buried · 1 hydrogen bond · protein-protein
- A–C · 62 Ų buried · 0 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 6 disulfide (disulfide).
Compared structures
- 2OKA · Crystal structure of Q9HYQ7_PSEAE from Pseudomonas aeruginosa. Northeast Structural… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9HYQ7
- Elsewhere: RCSB PDB 2OKA · PDBe 2OKA · UniProt Q9HYQ7
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