Research workbench
Crystal structure of the yuei protein from bacillus subtilis
Analyse Crystal structure of the yuei protein from bacillus subtilis in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2OHW
- Type
- protein
- Length
- 256 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Yuei protein
- UniProt
- O32092
- Pockets
- 2 · best druggability 0.76
Structure
x-ray diffraction · 1 distinct chain · 38% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Yuei protein | protein | 128 | 38% helix, 18% strand | O32092 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 755 | 0.76 | 0.81 | 48 | empty |
| 2 | 56 | 0.29 | 0.74 | 14 | empty |
Interfaces
1 interface between chains.
- A–B · 273 Ų buried · 4 hydrogen bonds · protein-protein
Compared structures
- 2OHW · Crystal structure of the YueI protein from Bacillus subtilis · the same entry in another collection · chain A against A, TM-score 1.00
- O32092 · AlphaFold monomer V2.0 prediction for uncharacterized protein yuei (O32092) · a predicted model of the same protein · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O32092
- Elsewhere: RCSB PDB 2OHW · PDBe 2OHW · UniProt O32092
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