Research workbench

Crystal structure of COG1633: uncharacterized conserved protein (ZP_00055496.1) from magnetospirillum magnetotacticum ms-1 at 2.00 a resolution

Analyse Crystal structure of COG1633: uncharacterized conserved protein (ZP_00055496.1)… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2OH3
Type: protein
Length: 149 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: COG1633: uncharacterized conserved protein
Ligands: ZN
Pockets: 1 · best druggability 0.56

Structure

x-ray diffraction · 1 distinct chain · 74% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	COG1633: uncharacterized conserved protein	protein	149	74% helix, 0% strand	—

Ligands and binding sites

ZN · Zinc ion · metal · chains A
PGE · Triethylene glycol · additive · 2 copies · chains A
IMD · Imidazole · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	81	0.56	0.86	23	IMD

Modifications

Observed in the structure: 6 modified (engineered).

Compared structures

2OH3 · Crystal structure of COG1633: Uncharacterized conserved protein (ZP_00055496.1) from… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 2OH3 · PDBe 2OH3

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.