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Structure of testis ACE with RXPA380

Analyse Structure of testis ACE with RXPA380 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
2OC2
Type
protein
Length
583 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Angiotensin-converting enzyme, somatic isoform
EC
3.4.15.1
UniProt
P12821
Ligands
RX3, ZN, CL
Pockets
2 · best druggability 0.88

Structure

x-ray diffraction · 1 distinct chain · 63% helix, 3% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AAngiotensin-converting enzyme, somatic isoform (EC 3.4.15.1)protein58363% helix, 3% strandP12821

Ligands and binding sites

  • RX3 · N-({(1S,2R)-2-[(S)-[(1R)-1-{[(benzyloxy)carbonyl]amino}-2-phenylethyl](hydroxy)phosphoryl]cyclopentyl}carbonyl)-L-trypt ophan · ligand · chains A
  • ZN · Zinc ion · metal · chains A
  • CL · Chloride ion · ion · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
19400.880.90132RX3
2560.300.7518empty

Modifications

Observed in the structure: 3 disulfide (disulfide).

Compared structures

  • 2OC2 · Structure of testis ACE with RXPA380 · the same entry in another collection · chain A against A, TM-score 1.00
  • P12821 · AlphaFold monomer V2.0 prediction for angiotensin-converting enzyme (P12821) · a predicted model of the same protein · chain A against A, TM-score 0.99

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