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Crystal structure of UPF0346 from staphylococcus aureus. northeast structural genomics target ZR218.

Analyse Crystal structure of UPF0346 from staphylococcus aureus. northeast structural… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2O6K
Type: protein
Length: 146 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: UPF0346 protein MW1311
UniProt: Q7BEF3
Pockets: 1 · best druggability 0.39

Structure

x-ray diffraction · 2 distinct chains · 65% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	UPF0346 protein MW1311	protein	72	65% helix, 0% strand	Q7BEF3
B	UPF0346 protein MW1311	protein	74	65% helix, 0% strand	Q7BEF3

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	103	0.39	0.76	18	empty

Interfaces

1 interface between chains.

A–B · 505 Å² buried · 7 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 4 modified (engineered).

Compared structures

2O6K · Crystal structure of UPF0346 from Staphylococcus aureus. Northeast Structural Genomics… · the same entry in another collection · chain A against A, TM-score 1.00
Q7BEF3 · AlphaFold monomer V2.0 prediction for UPF0346 protein in crr 3'REGION (Q7BEF3) · a predicted model of the same protein · chain A against A, TM-score 0.94

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q7BEF3
Elsewhere: RCSB PDB 2O6K · PDBe 2O6K · UniProt Q7BEF3

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