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Crystal structure of protein SSO1042 from sulfolobus solfataricus, pfam DUF54

Analyse Crystal structure of protein SSO1042 from sulfolobus solfataricus, pfam DUF54 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2NWU
Type: protein
Length: 264 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: UPF0201 protein SSO1042
UniProt: Q97Z89
Pockets: 1 · best druggability 0.29

Structure

x-ray diffraction · 2 distinct chains · 34% helix, 30% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	UPF0201 protein SSO1042	protein	131	35% helix, 28% strand	Q97Z89
B	UPF0201 protein SSO1042	protein	133	34% helix, 31% strand	Q97Z89

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	80	0.29	0.73	16	empty

Interfaces

1 interface between chains.

A–B · 580 Å² buried · 12 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 8 modified (engineered).

Compared structures

2NWU · Crystal structure of protein SSO1042 from Sulfolobus solfataricus, Pfam DUF54 · the same entry in another collection · chain A against A, TM-score 1.00
Q97Z89 · AlphaFold monomer V2.0 prediction for UPF0201 protein SSO1042 (Q97Z89) · a predicted model of the same protein · chain B against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q97Z89
Elsewhere: RCSB PDB 2NWU · PDBe 2NWU · UniProt Q97Z89

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