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1.15 ångström crystal structure of the MA3 domain of PDCD4

Analyse 1.15 ångström crystal structure of the MA3 domain of PDCD4 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
2NSZ
Type
protein
Length
129 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Programmed cell death protein 4
UniProt
Q61823
Ligands
SO4

Structure

x-ray diffraction · 1 distinct chain · 77% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AProgrammed cell death protein 4protein12977% helix, 0% strandQ61823

Ligands and binding sites

  • SO4 · Sulfate ion · ion · 2 copies · chains A
  • GOL · Glycerol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 2NSZ · 1.15 Angstrom Crystal Structure of the MA3 domain of Pdcd4 · the same entry in another collection · chain A against A, TM-score 1.00
  • Q61823 · AlphaFold monomer V2.0 prediction for programmed cell death protein 4 (Q61823) · a predicted model of the same protein · chain A against A, TM-score 0.96

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