Research workbench
High resolution crystal structure of escherichia COLI endonuclease IV (endo IV) E261Q mutant
Analyse High resolution crystal structure of escherichia COLI endonuclease IV (endo IV)… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2NQH
- Type
- protein
- Length
- 279 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Endonuclease 4
- EC
- 3.1.21.2
- UniProt
- P0A6C1
- Ligands
- ZN, PO4
- Pockets
- 1 · best druggability 0.39
Structure
x-ray diffraction · 1 distinct chain · 45% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Endonuclease 4 (EC 3.1.21.2) | protein | 279 | 45% helix, 15% strand | P0A6C1 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 119 | 0.39 | 0.75 | 28 | ZN, PO4 |
Compared structures
- 2NQH · High Resolution crystal structure of Escherichia coli endonuclease IV (Endo IV) E261Q… · the same entry in another collection · chain A against A, TM-score 1.00
- P0A6C1 · AlphaFold monomer V2.0 prediction for endonuclease 4 (P0A6C1) · a predicted model of the same protein · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0A6C1
- Elsewhere: RCSB PDB 2NQH · PDBe 2NQH · UniProt P0A6C1
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.