Research workbench
Solution NMR structure of palmitated SCP2L2 from aedes aegypti
Analyse Solution NMR structure of palmitated SCP2L2 from aedes aegypti in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2NBN
- Type
- protein
- Length
- 111 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Sterol carrier protein 2-like 2
- UniProt
- Q0GY13
- Ligands
- PLM
- Pockets
- 1 · best druggability 0.80
Structure
solution nmr · 1 distinct chain · 34% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sterol carrier protein 2-like 2 | protein | 111 | 34% helix, 23% strand | Q0GY13 |
Ligands and binding sites
- PLM · Palmitic acid · ligand · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 599 | 0.80 | 0.85 | 49 | PLM |
Compared structures
- 2NBN · Solution NMR structure of palmitated SCP2L2 from Aedes aegypti · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q0GY13
- Elsewhere: RCSB PDB 2NBN · PDBe 2NBN · UniProt Q0GY13
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