Research workbench
Novel antimicrobial peptide PADBS1R1 designed from the ribosomal protein L39E from pyrobaculum aerophilum using bioinformatics
Analyse Novel antimicrobial peptide PADBS1R1 designed from the ribosomal protein L39E… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2N9R
- Type
- protein
- Length
- 19 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Antimicrobial peptide PADBS1R1
- Ligands
- NH2
Structure
solution nmr · 1 distinct chain · 79% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Antimicrobial peptide PADBS1R1 | protein | 19 | 79% helix, 0% strand | — |
Ligands and binding sites
- NH2 · Amino group · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 2N9R · Novel antimicrobial peptide PaDBS1R1 designed from the ribosomal protein L39E from… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 2N9R · PDBe 2N9R
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