Research workbench
NMR structure of the homeodomain transcription factor GBX1[E23R,R58E] from homo sapiens
Analyse NMR structure of the homeodomain transcription factor GBX1[E23R,R58E] from homo… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2N8G
- Type
- protein
- Length
- 71 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Homeobox protein gbx-1
- UniProt
- Q14549
- Pockets
- 2 · best druggability 0.43
Structure
solution nmr · 1 distinct chain · 54% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Homeobox protein gbx-1 | protein | 71 | 54% helix, 0% strand | Q14549 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 92 | 0.43 | 0.79 | 15 | empty |
| 2 | 58 | 0.30 | 0.75 | 11 | empty |
Compared structures
- 2N8G · NMR Structure of the homeodomain transcription factor Gbx1[E23R,R58E] from Homo sapiens · the same entry in another collection · chain A against A, TM-score 1.00
- Q14549 · AlphaFold monomer V2.0 prediction for homeobox protein gbx-1 (Q14549) · a predicted model of the same protein · chain A against A, TM-score 0.72
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q14549
- Elsewhere: RCSB PDB 2N8G · PDBe 2N8G · UniProt Q14549
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