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Solution structure of complex between DNA G-quadruplex and G- quadruplex recognition domain of rhau

Analyse Solution structure of complex between DNA G-quadruplex and G- quadruplex… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
2N21
Type
protein + DNA
Length
38 residues
Chains
2
Method
solution nmr
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
ATP-dependent RNA helicase DHX36; DNA (5'- D(*TP*TP*GP*GP*GP*TP*GP*GP*GP*TP*GP*GP*GP*TP*GP…
EC
3.6.4.12, 3.6.4.13
UniProt
Q9H2U1

Structure

solution nmr · 2 distinct chains · 35% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AATP-dependent RNA helicase DHX36 (EC 3.6.4.12, 3.6.4.13)protein2035% helix, 0% strandQ9H2U1
BDNA (5'- D(*TP*TP*GP*GP*GP*TP*GP*GP*GP*TP*GP*GP*GP*TP*GP*GP*GP*T)-3')dna18——

Interfaces

1 interface between chains.

  • A–B · 516 Ų buried · 10 hydrogen bonds · protein-nucleic

Compared structures

  • 2N21 · Solution structure of complex between DNA G-quadruplex and G-quadruplex recognition… · the same entry in another collection · chain A against A, TM-score 1.00
  • Q9H2U1 · AlphaFold monomer V2.0 prediction for ATP-dependent DNA/RNA helicase DHX36 (Q9H2U1) · a predicted model of the same protein · chain A against A, TM-score 0.27

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