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NMR structure of the complex between the C-terminal domain of the rift valley fever virus protein nss and the pH domain of the TFB1 subunit of tfiih

Analyse NMR structure of the complex between the C-terminal domain of the rift valley… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2N0Y
Type: protein
Length: 139 residues
Chains: 2
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: RNA polymerase II transcription factor B subunit 1; Non-structural protein ns-S
UniProt: P32776, P21698

Structure

solution nmr · 2 distinct chains · 17% helix, 31% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	RNA polymerase II transcription factor B subunit 1	protein	115	17% helix, 37% strand	P32776
B	Non-structural protein ns-S	protein	24	17% helix, 4% strand	P21698

Interfaces

1 interface between chains.

A–B · 557 Å² buried · 11 hydrogen bonds · protein-protein

Compared structures

2N0Y · NMR structure of the complex between the C-terminal domain of the Rift Valley fever virus… · the same entry in another collection · chain A against A, TM-score 1.00
P32776 · AlphaFold monomer V2.0 prediction for general transcription and DNA repair factor iih… · a predicted model of the same protein · chain A against A, TM-score 0.85

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P32776
Every structure of UniProt P21698
Elsewhere: RCSB PDB 2N0Y · PDBe 2N0Y · UniProt P32776 · UniProt P21698

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