Research workbench
Crystal structure of antigen 85C from mycobacterium tuberculosis
Analyse Crystal structure of antigen 85C from mycobacterium tuberculosis in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1DQZ
- Type
- protein
- Length
- 560 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein (antigen 85-C)
- UniProt
- P0A4V4
- Pockets
- 6 · best druggability 0.79
Structure
x-ray diffraction · 1 distinct chain · 39% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Protein (antigen 85-C) | protein | 280 | 39% helix, 16% strand | P0A4V4 |
Pockets
6 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 713 | 0.79 | 0.83 | 68 | empty |
| 2 | 124 | 0.36 | 0.73 | 21 | empty |
| 3 | 61 | 0.34 | 0.77 | 16 | empty |
| 4 | 96 | 0.32 | 0.73 | 22 | empty |
| 5 | 54 | 0.31 | 0.76 | 12 | empty |
Interfaces
1 interface between chains.
- A–B · 901 Ų buried · 6 hydrogen bonds · protein-protein
Compared structures
- 1DQZ · Crystal structure of antigen 85C from mycobacterium tuberculosis · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0A4V4
- Elsewhere: RCSB PDB 1DQZ · PDBe 1DQZ · UniProt P0A4V4
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