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Structure of the bee venom toxin melittin with [(C5H5)RU]+ fragment attached to the tryptophan residue

Analyse Structure of the bee venom toxin melittin with [(C5H5)RU]+ fragment attached to… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
2MW6
Type
protein
Length
26 residues
Chains
1
Method
solution nmr
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Melittin
UniProt
P01501
Ligands
3UQ, NH2

Structure

solution nmr · 1 distinct chain · 73% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AMelittinprotein2673% helix, 0% strandP01501

Ligands and binding sites

  • 3UQ · [(1,2,3,4,5-eta)-cyclopentadienyl][(1,2,3,4,4a,8a-eta)-naphthalene]ruthenium(1+) · ligand · chains A
  • NH2 · Amino group · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 2MW6 · Structure of the bee venom toxin melittin with [(C5H5)Ru]+ fragment attached to the… · the same entry in another collection · chain A against A, TM-score 1.00
  • P01501 · AlphaFold monomer V2.0 prediction for melittin (P01501) · a predicted model of the same protein · chain A against A, TM-score 0.46

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