Research workbench
Strcucture of decorin binding protein a from strain pbr of borrelia garinii
Analyse Strcucture of decorin binding protein a from strain pbr of borrelia garinii in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2MTD
- Type
- protein
- Length
- 164 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Decorin binding protein a
- UniProt
- B8F1J8
- Pockets
- 2 · best druggability 0.69
Structure
solution nmr · 1 distinct chain · 76% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Decorin binding protein a | protein | 164 | 76% helix, 0% strand | B8F1J8 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 271 | 0.69 | 0.84 | 34 | empty |
| 2 | 140 | 0.44 | 0.75 | 21 | empty |
Compared structures
- 2MTD · Strcucture of Decorin Binding Protein A from strain PBr of Borrelia garinii · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B8F1J8
- Elsewhere: RCSB PDB 2MTD · PDBe 2MTD · UniProt B8F1J8
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