Research workbench
Structure of decorin binding protein a from strain N40 of borrelia burgdorferi
Analyse Structure of decorin binding protein a from strain N40 of borrelia burgdorferi in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2MTC
- Type
- protein
- Length
- 166 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Decorin-binding protein a
- UniProt
- C6C2E4
- Pockets
- 2 · best druggability 0.76
Structure
solution nmr · 1 distinct chain · 66% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Decorin-binding protein a | protein | 166 | 66% helix, 0% strand | C6C2E4 |
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 137 | 0.76 | 0.94 | 25 | empty |
| 2 | 259 | 0.61 | 0.80 | 31 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 2MTC · Structure of decorin binding protein A from strain N40 of Borrelia burgdorferi · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C6C2E4
- Elsewhere: RCSB PDB 2MTC · PDBe 2MTC · UniProt C6C2E4
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