Research workbench
Solution structure and molecular determinants of hemoglobin binding of the first neat domain of isdb in staphylococcus aureus
Analyse Solution structure and molecular determinants of hemoglobin binding of the… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2MOQ
- Type
- protein
- Length
- 148 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Iron-regulated surface determinant protein B
- UniProt
- Q8NX66
- Pockets
- 2 · best druggability 0.74
Structure
solution nmr · 1 distinct chain · 5% helix, 47% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Iron-regulated surface determinant protein B | protein | 148 | 5% helix, 47% strand | Q8NX66 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 304 | 0.74 | 0.86 | 54 | empty |
| 2 | 58 | 0.38 | 0.79 | 14 | empty |
Compared structures
- 2MOQ · Solution Structure and Molecular determinants of Hemoglobin Binding of the first NEAT… · the same entry in another collection · chain A against A, TM-score 1.00
- Q8NX66 · AlphaFold monomer V2.0 prediction for iron-regulated surface determinant protein B… · a predicted model of the same protein · chain A against A, TM-score 0.81
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8NX66
- Elsewhere: RCSB PDB 2MOQ · PDBe 2MOQ · UniProt Q8NX66
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