Research workbench
Structure of the PSCD4-domain of the cell wall protein pleuralin-1 from the diatom cylindrotheca fusiformis
Analyse Structure of the PSCD4-domain of the cell wall protein pleuralin-1 from the… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2MK0
- Type
- protein
- Length
- 88 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- HEP200 protein
- UniProt
- O22015
- Pockets
- 1 · best druggability 0.58
Structure
solution nmr · 1 distinct chain · 14% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | HEP200 protein | protein | 88 | 14% helix, 0% strand | O22015 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 275 | 0.58 | 0.78 | 38 | empty |
Modifications
Observed in the structure: 5 disulfide (disulfide).
Compared structures
- 2MK0 · Structure of the PSCD4-domain of the cell wall protein pleuralin-1 from the diatom… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O22015
- Elsewhere: RCSB PDB 2MK0 · PDBe 2MK0 · UniProt O22015
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