Research workbench
Solution NMR structure of phd type 1 zinc finger domain 1 of lysine- specific demethylase lid from drosophila melanogaster, northeast structural genomics consortium (nesg) target FR824J
Analyse Solution NMR structure of phd type 1 zinc finger domain 1 of lysine- specific… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2MIQ
- Type
- protein
- Length
- 94 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Lysine-specific demethylase lid
- EC
- 1.14.11.-
- UniProt
- Q9VMJ7
- Ligands
- ZN
Structure
solution nmr · 1 distinct chain · 7% helix, 9% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Lysine-specific demethylase lid (EC 1.14.11.-) | protein | 94 | 7% helix, 9% strand | Q9VMJ7 |
Ligands and binding sites
- ZN · Zinc ion · metal · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 2MIQ · Solution NMR Structure of PHD Type 1 Zinc Finger Domain 1 of Lysine-specific Demethylase… · the same entry in another collection · chain A against A, TM-score 1.00
- Q9VMJ7 · AlphaFold monomer V2.0 prediction for lysine-specific demethylase lid (Q9VMJ7) · a predicted model of the same protein · chain A against A, TM-score 0.50
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9VMJ7
- Elsewhere: RCSB PDB 2MIQ · PDBe 2MIQ · UniProt Q9VMJ7
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