Research workbench

RLIP76 (gap-gbd)

Analyse RLIP76 (gap-gbd) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2MBG
Type: protein
Length: 265 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Rala-binding protein 1
UniProt: Q15311
Pockets: 2 · best druggability 0.76

Structure

solution nmr · 1 distinct chain · 63% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Rala-binding protein 1	protein	265	63% helix, 0% strand	Q15311

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	650	0.76	0.82	50	empty
2	53	0.40	0.81	13	empty

Compared structures

2MBG · Rlip76 (gap-gbd) · the same entry in another collection · chain A against A, TM-score 1.00
Q15311 · AlphaFold monomer V2.0 prediction for rala-binding protein 1 (Q15311) · a predicted model of the same protein · chain A against A, TM-score 0.83

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q15311
Elsewhere: RCSB PDB 2MBG · PDBe 2MBG · UniProt Q15311

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