Research workbench
Atomic-resolution structure of a cross-beta protofilament
Analyse Atomic-resolution structure of a cross-beta protofilament in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2M5N
- Type
- protein
- Length
- 176 residues
- Chains
- 16
- Method
- solid-state nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Transthyretin
- UniProt
- P02766
Structure
solid-state nmr · 1 distinct chain · 0% helix, 45% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P | Transthyretin | protein | 11 | 0% helix, 45% strand | P02766 |
Interfaces
36 interfaces between chains.
- F–G · 510 Ų buried · 12 hydrogen bonds · protein-protein
- E–F · 509 Ų buried · 13 hydrogen bonds · protein-protein
- K–L · 509 Ų buried · 13 hydrogen bonds · protein-protein
- N–O · 509 Ų buried · 13 hydrogen bonds · protein-protein
- G–H · 507 Ų buried · 12 hydrogen bonds · protein-protein
Compared structures
- 2M5N · Atomic-resolution structure of a cross-beta protofilament · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P02766
- Elsewhere: RCSB PDB 2M5N · PDBe 2M5N · UniProt P02766
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