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Structure of dido phd domain

Analyse Structure of dido phd domain in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
2M3H
Type
protein
Length
61 residues
Chains
1
Method
solution nmr
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Death-inducer obliterator 1
UniProt
Q9BTC0
Ligands
ZN

Structure

solution nmr · 1 distinct chain · 23% helix, 13% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ADeath-inducer obliterator 1protein6123% helix, 13% strandQ9BTC0

Ligands and binding sites

  • ZN · Zinc ion · metal · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 2M3H · Structure of Dido PHD domain · the same entry in another collection · chain A against A, TM-score 1.00
  • Q9BTC0 · AlphaFold monomer V2.0 prediction for death-inducer obliterator 1 (Q9BTC0) · a predicted model of the same protein · chain A against A, TM-score 0.77

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