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Solution NMR structure of cyclin-dependent kinase 2-associated protein 2 (CDK2AP2, doc-1R) from homo sapiens, northeast structural genomics consortium (nesg) target HR8910C

Analyse Solution NMR structure of cyclin-dependent kinase 2-associated protein 2… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
2M1L
Type
protein
Length
138 residues
Chains
2
Method
solution nmr
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Cyclin-dependent kinase 2-associated protein 2
UniProt
O75956
Pockets
1 · best druggability 0.28

Structure

solution nmr · 1 distinct chain · 64% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
A, BCyclin-dependent kinase 2-associated protein 2protein6964% helix, 0% strandO75956

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
1520.280.7512empty

Interfaces

1 interface between chains.

  • A–B · 2072 Ų buried · 29 hydrogen bonds · protein-protein

Compared structures

  • 2M1L · Solution NMR Structure of Cyclin-dependent kinase 2-associated protein 2 (CDK2AP2… · the same entry in another collection · chain A against A, TM-score 1.00
  • O75956 · AlphaFold monomer V2.0 prediction for cyclin-dependent kinase 2-associated protein 2… · a predicted model of the same protein · chain A against A, TM-score 0.70

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