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NMR solution structure of the kappa-zeta region of S.CEREVISIAE group II intron AI5(GAMMA)

Analyse NMR solution structure of the kappa-zeta region of S.CEREVISIAE group II intron… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2LU0
Type: RNA
Length: 49 nucleotides
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: RNA (49-mer)
Pockets: 2 · best druggability 0.42

Structure

solution nmr · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	RNA (49-mer)	rna	49	—	—

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	141	0.42	0.76	15	empty
2	133	0.38	0.74	13	empty

Compared structures

2LU0 · NMR solution structure of the kappa-zeta region of S.cerevisiae group II intron ai5(gamma) · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 2LU0 · PDBe 2LU0

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