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Domain interaction in thermotoga maritima nusg

Analyse Domain interaction in thermotoga maritima nusg in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2LQ8
Type: protein
Length: 177 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Transcription antitermination protein nusg
UniProt: P29397
Pockets: 2 · best druggability 0.60

Structure

solution nmr · 1 distinct chain · 20% helix, 28% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Transcription antitermination protein nusg	protein	177	20% helix, 28% strand	P29397

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	289	0.60	0.78	32	empty
2	88	0.33	0.74	19	empty

Compared structures

2LQ8 · Domain interaction in Thermotoga maritima NusG · the same entry in another collection · chain A against A, TM-score 1.00
P29397 · AlphaFold monomer V2.0 prediction for transcription TERMINATION/ANTITERMINATION protein… · a predicted model of the same protein · chain A against A, TM-score 0.91

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P29397
Elsewhere: RCSB PDB 2LQ8 · PDBe 2LQ8 · UniProt P29397

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