Research workbench
PDZ domain of cal (cystic fibrosis transmembrane regulator-associated ligand)
Analyse PDZ domain of cal (cystic fibrosis transmembrane regulator-associated ligand) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2LOB
- Type
- protein
- Length
- 94 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Golgi-associated PDZ and coiled-coil motif-containing protein; Cystic fibrosis…
- EC
- 3.6.3.49
- UniProt
- Q9HD26, P13569
Structure
solution nmr · 2 distinct chains · 14% helix, 39% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Golgi-associated PDZ and coiled-coil motif-containing protein | protein | 86 | 15% helix, 41% strand | Q9HD26 |
| B | Cystic fibrosis transmembrane conductance regulator (EC 3.6.3.49) | protein | 8 | 0% helix, 25% strand | P13569 |
Interfaces
1 interface between chains.
- A–B · 542 Ų buried · 26 hydrogen bonds · protein-protein
Compared structures
- 2LOB · PDZ Domain of CAL (Cystic Fibrosis Transmembrane Regulator-Associated Ligand) · the same entry in another collection · chain A against A, TM-score 1.00
- Q9HD26 · AlphaFold monomer V2.0 prediction for golgi-associated PDZ and coiled-coil… · a predicted model of the same protein · chain A against A, TM-score 0.79
- P13569 · AlphaFold monomer V2.0 prediction for cystic fibrosis transmembrane conductance regulator… · a predicted model of the same protein · chain B against A, TM-score 0.34
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9HD26
- Every structure of UniProt P13569
- Elsewhere: RCSB PDB 2LOB · PDBe 2LOB · UniProt Q9HD26 · UniProt P13569
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