Research workbench
Evolutionary diversification of mesobuthus alpha-scorpion toxins affecting sodium channels
Analyse Evolutionary diversification of mesobuthus alpha-scorpion toxins affecting… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2LKB
- Type
- protein
- Length
- 66 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Neurotoxin meunatx-5
- UniProt
- P86405
- Pockets
- 1 · best druggability 0.35
Structure
solution nmr · 1 distinct chain · 15% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Neurotoxin meunatx-5 | protein | 66 | 15% helix, 20% strand | P86405 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 70 | 0.35 | 0.77 | 25 | empty |
Modifications
Observed in the structure: 4 disulfide (disulfide).
Compared structures
- 2LKB · Evolutionary diversification of Mesobuthus alpha-scorpion toxins affecting sodium channels · the same entry in another collection · chain A against A, TM-score 1.00
- P86405 · AlphaFold monomer V2.0 prediction for sodium channel neurotoxin meunatxalpha-5 (P86405) · a predicted model of the same protein · chain A against A, TM-score 0.57
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P86405
- Elsewhere: RCSB PDB 2LKB · PDBe 2LKB · UniProt P86405
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