Research workbench
Structure of the DNA complex of the C-terminal domain of ler
Analyse Structure of the DNA complex of the C-terminal domain of ler in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2LEV
- Type
- protein + DNA
- Length
- 87 residues
- Chains
- 3
- Method
- solution nmr; solution scattering
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Ler; DNA (5'-D(*GP*CP*GP*AP*TP*AP*AP*TP*TP*GP*AP*TP*AP*GP*G)- 3'); DNA…
- UniProt
- E9N650
Structure
solution nmr; solution scattering · 3 distinct chains · 21% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ler | protein | 57 | 21% helix, 16% strand | E9N650 |
| B | DNA (5'-D(*GP*CP*GP*AP*TP*AP*AP*TP*TP*GP*AP*TP*AP*GP*G)- 3') | dna | 15 | — | — |
| C | DNA (5'-D(*CP*CP*TP*AP*TP*CP*AP*AP*TP*TP*AP*TP*CP*GP*C)- 3') | dna | 15 | — | — |
Interfaces
3 interfaces between chains.
- B–C · 688 Ų buried · 76 hydrogen bonds · nucleic-nucleic
- A–C · 300 Ų buried · 8 hydrogen bonds · protein-nucleic
- A–B · 222 Ų buried · 6 hydrogen bonds · protein-nucleic
Compared structures
- 2LEV · Structure of the DNA complex of the C-Terminal domain of Ler · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt E9N650
- Elsewhere: RCSB PDB 2LEV · PDBe 2LEV · UniProt E9N650
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