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Monomeric mouse APOAI(1-216)

Analyse Monomeric mouse APOAI(1-216) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2LEM
Type: protein
Length: 216 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Apolipoprotein a-I
UniProt: Q00623
Pockets: 3 · best druggability 0.64

Structure

solution nmr · 1 distinct chain · 73% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Apolipoprotein a-I	protein	216	73% helix, 0% strand	Q00623

Pockets

3 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	211	0.64	0.83	32	empty
2	280	0.61	0.80	47	empty
3	114	0.52	0.81	20	empty

Compared structures

2LEM · Monomeric Mouse ApoAI(1-216) · the same entry in another collection · chain A against A, TM-score 1.00
Q00623 · AlphaFold monomer V2.0 prediction for apolipoprotein a-I (Q00623) · a predicted model of the same protein · chain A against A, TM-score 0.22

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q00623
Elsewhere: RCSB PDB 2LEM · PDBe 2LEM · UniProt Q00623

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