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A protein from haloferax volcanii

Analyse A protein from haloferax volcanii in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2L83
Type: protein
Length: 87 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Small archaeal modifier protein 1
UniProt: D4GUF6
Pockets: 2 · best druggability 0.31

Structure

solution nmr · 1 distinct chain · 23% helix, 13% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Small archaeal modifier protein 1	protein	87	23% helix, 13% strand	D4GUF6

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	76	0.31	0.74	21	empty
2	56	0.31	0.76	15	empty

Compared structures

2L83 · A protein from Haloferax volcanii · the same entry in another collection · chain A against A, TM-score 1.00
D4GUF6 · AlphaFold monomer V2.0 prediction for small archaeal modifier protein 1 (D4GUF6) · a predicted model of the same protein · chain A against A, TM-score 0.44

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt D4GUF6
Elsewhere: RCSB PDB 2L83 · PDBe 2L83 · UniProt D4GUF6

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