Research workbench
Solution structure of human J-protein co-chaperone, DPH4
Analyse Solution structure of human J-protein co-chaperone, DPH4 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2L6L
- Type
- protein
- Length
- 155 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Dnaj homolog subfamily C member 24
- UniProt
- Q6P3W2
- Ligands
- ZN
- Pockets
- 2 · best druggability 0.36
Structure
solution nmr · 1 distinct chain · 39% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Dnaj homolog subfamily C member 24 | protein | 155 | 39% helix, 16% strand | Q6P3W2 |
Ligands and binding sites
- ZN · Zinc ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 112 | 0.36 | 0.74 | 14 | empty |
| 2 | 54 | 0.30 | 0.76 | 16 | empty |
Compared structures
- 2L6L · Solution structure of human J-protein co-chaperone, Dph4 · the same entry in another collection · chain A against A, TM-score 1.00
- Q6P3W2 · AlphaFold monomer V2.0 prediction for dnaj homolog subfamily C member 24 (Q6P3W2) · a predicted model of the same protein · chain A against A, TM-score 0.38
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6P3W2
- Elsewhere: RCSB PDB 2L6L · PDBe 2L6L · UniProt Q6P3W2
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