Research workbench
The DNA-recognition fold of SSO7C4 suggests a new member of spovt-abrb superfamily from archaea.
Analyse The DNA-recognition fold of SSO7C4 suggests a new member of spovt-abrb… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2L66
- Type
- protein
- Length
- 106 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Transcriptional regulator, abrb family
- UniProt
- D0KRA5
- Pockets
- 1 · best druggability 0.77
Structure
solution nmr · 1 distinct chain · 11% helix, 36% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Transcriptional regulator, abrb family | protein | 53 | 11% helix, 36% strand | D0KRA5 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 177 | 0.77 | 0.92 | 39 | empty |
Interfaces
1 interface between chains.
- A–B · 1956 Ų buried · 36 hydrogen bonds · protein-protein
Compared structures
- 2L66 · The DNA-recognition fold of Sso7c4 suggests a new member of SpoVT-AbrB superfamily from… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt D0KRA5
- Elsewhere: RCSB PDB 2L66 · PDBe 2L66 · UniProt D0KRA5
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.