Research workbench
Three dimensional structure of pineapple cystatin
Analyse Three dimensional structure of pineapple cystatin in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2L4V
- Type
- protein
- Length
- 135 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Cystatin
- UniProt
- Q687J0
- Pockets
- 3 · best druggability 0.60
Structure
solution nmr · 1 distinct chain · 13% helix, 30% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cystatin | protein | 135 | 13% helix, 30% strand | Q687J0 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 56 | 0.60 | 0.91 | 23 | empty |
| 2 | 75 | 0.40 | 0.78 | 17 | empty |
| 3 | 75 | 0.37 | 0.77 | 15 | empty |
Compared structures
- 2L4V · Three Dimensional Structure of Pineapple Cystatin · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q687J0
- Elsewhere: RCSB PDB 2L4V · PDBe 2L4V · UniProt Q687J0
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