Research workbench
Solution structure of the streptococcus pneumoniae rrgb pilus backbone D1 domain
Analyse Solution structure of the streptococcus pneumoniae rrgb pilus backbone D1 domain in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2L4O
- Type
- protein
- Length
- 175 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Cell wall surface anchor family protein
- UniProt
- Q97SC2
- Pockets
- 2 · best druggability 0.51
Structure
solution nmr · 1 distinct chain · 5% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cell wall surface anchor family protein | protein | 175 | 5% helix, 27% strand | Q97SC2 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 135 | 0.51 | 0.80 | 24 | empty |
| 2 | 98 | 0.40 | 0.76 | 18 | empty |
Compared structures
- 2L4O · Solution structure of the Streptococcus pneumoniae RrgB pilus backbone D1 domain · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q97SC2
- Elsewhere: RCSB PDB 2L4O · PDBe 2L4O · UniProt Q97SC2
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.