Research workbench
Spatial structure of lch-alpha peptide from two-component lantibiotic system lichenicidin VK21
Analyse Spatial structure of lch-alpha peptide from two-component lantibiotic system… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2KTN
- Type
- protein
- Length
- 31 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Lichenicidin VK21 A1
- UniProt
- P86475
- Ligands
- 2KT
Structure
solution nmr · 1 distinct chain · 10% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Lichenicidin VK21 A1 | protein | 31 | 10% helix, 0% strand | P86475 |
Ligands and binding sites
- 2KT · 2-ketobutyric acid · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 5 modified, 1 covalent, 1 d-amino (nonstandard, covalent ligand, D-amino acid).
Compared structures
- P86475 · AlphaFold monomer V2.0 prediction for lantibiotic lichenicidin VK21 A1 (P86475) · a predicted model of the same protein · chain A against A, TM-score 0.26
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P86475
- Elsewhere: RCSB PDB 2KTN · PDBe 2KTN · UniProt P86475
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